A ChIP on Chip Analysis tool. ChIPMonk is a tool for viewing and analysing ChIP on Chip data. It maps one or more sets of array data onto an annotated genome assembly and provides stastical tools to filter the data and reporting tools to summarise it.

ChIP Monk Features:
1. Import of data from Nimblegen arrays (other formats can be added if people send us examples.)
2. Noramlisation of data (both per array and per probe)
3. Various data plotting options to assess data quality and the effectiveness of normalisation
4. Creation of data groups for visualisation and analysis
5. Visualisation of data against an annotated genome.
6. Statistical analysis of data to find probes of interest
7. Creation of reports containing probes, data and genome annotation

Requirements:
* Java

The license of this software is Free, you can free download and free use this calculator software.