The version is 0.2 Alpha. HoKAlign is a GUI under Windows for several free command line driven sequence alignment programs. Currently supported programs 1. ClustalW (GUI: ClustalX 2) 2. ClustalW2 (GUI: ClustalX 1) 3. Muscle (versions 3.6 and 3.7) 4. MAFFT (supported, the source for Cygwin is...